Published Works

• Degasperi, A., Amarante, T. D., Czarnecki, J., Shooter, S., Zou, X., Glodzik, D., Morganella, S., Nanda, A. S., Badja, C., Koh, G., Momen, S. E., Georgakopoulos-Soares, I., Dias, J. M. L., Young, J., Memari, Y., Davies, H., & Nik-Zainal, S. (2020). A practical framework and online tool for mutational signature analyses show inter-tissue variation and driver dependencies. Nature cancer, 1(2), 249–263. https://doi.org/10.1038/s43018-020-0027-5
• Staaf, J., Glodzik, D., Bosch, A., Vallon-Christersson, J., Reuterswärd, C., Häkkinen, J., Degasperi, A., Amarante, T. D., Saal, L. H., Hegardt, C., Stobart, H., Ehinger, A., Larsson, C., Rydén, L., Loman, N., Malmberg, M., Kvist, A., Ehrencrona, H., Davies, H. R., Borg, Å., … Nik-Zainal, S. (2019). Whole-genome sequencing of triple-negative breast cancers in a population-based clinical study. Nature medicine, 25(10), 1526–1533. https://doi.org/10.1038/s41591-019-0582-4
• De Mattos-Arruda, L., Sammut, S. J., Ross, E. M., Bashford-Rogers, R., Greenstein, E., Markus, H., Morganella, S., Teng, Y., Maruvka, Y., Pereira, B., Rueda, O. M., Chin, S. F., Contente-Cuomo, T., Mayor, R., Arias, A., Ali, H. R., Cope, W., Tiezzi, D., Dariush, A., Dias Amarante, T., … Caldas, C. (2019). The Genomic and Immune Landscapes of Lethal Metastatic Breast Cancer. Cell reports, 27(9), 2690–2708.e10. https://doi.org/10.1016/j.celrep.2019.04.098